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OSA Publishing

1 December 2014, Volume 5, Issue 12, pp. 4101-4436   28 articles

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Introduction to the BIOMED 2014 feature issue

Biomed. Opt. Express 5(12), 4144-4144 (2014)  View: HTML | PDF

Endoscopes, Catheters and Micro-Optics

Polarised stereo endoscope and narrowband detection for minimal access surgery

Biomed. Opt. Express 5(12), 4108-4117 (2014)  View: HTML | PDF

Miniature objective lens with variable focus for confocal endomicroscopy

Biomed. Opt. Express 5(12), 4350-4361 (2014)  View: HTML | PDF

Image Processing

Quantifying the vascular response to ischemia with speckle variance optical coherence tomography

Biomed. Opt. Express 5(12), 4118-4130 (2014)  View: HTML | PDF

Three-dimensional motion correction using speckle and phase for in vivo computed optical interferometric tomography

Biomed. Opt. Express 5(12), 4131-4143 (2014)  View: HTML | PDF  [Suppl. Mat. (2)]

Automated method for the segmentation and morphometry of nerve fibers in large-scale CARS images of spinal cord tissue

Biomed. Opt. Express 5(12), 4145-4161 (2014)  View: HTML | PDF

Blood vessel segmentation and width estimation in ultra-wide field scanning laser ophthalmoscopy

Biomed. Opt. Express 5(12), 4329-4337 (2014)  View: HTML | PDF

Image Reconstruction and Inverse Problems

Nonuniform update for sparse target recovery in fluorescence molecular tomography accelerated by ordered subsets

Biomed. Opt. Express 5(12), 4249-4259 (2014)  View: HTML | PDF

Microscopy

Enhanced quantitative phase imaging in self-interference digital holographic microscopy using an electrically focus tunable lens

Biomed. Opt. Express 5(12), 4213-4222 (2014)  View: HTML | PDF  [Suppl. Mat. (4)]

In vivo nonlinear spectral imaging as a tool to monitor early spectroscopic and metabolic changes in a murine cutaneous squamous cell carcinoma model

Biomed. Opt. Express 5(12), 4281-4299 (2014)  View: HTML | PDF

Fast monitoring of in-vivo conformational changes in myosin using single scan polarization-SHG microscopy

Biomed. Opt. Express 5(12), 4362-4373 (2014)  View: HTML | PDF  [Suppl. Mat. (1)]

Digitally synthesized beat frequency-multiplexed fluorescence lifetime spectroscopy

Biomed. Opt. Express 5(12), 4428-4436 (2014)  View: HTML | PDF

Nanotechnology and Plasmonics

Trace cancer biomarker quantification using polystyrene-functionalized gold nanorods

Biomed. Opt. Express 5(12), 4101-4107 (2014)  View: HTML | PDF

Novel Light Sources, Optics, and Detectors

Terahertz spectroscopic imaging and properties of gastrointestinal tract in a rat model

Biomed. Opt. Express 5(12), 4162-4170 (2014)  View: HTML | PDF

Ophthalmology Applications

Simultaneous optical coherence tomography and lipofuscin autofluorescence imaging of the retina with a single broadband light source at 480nm

Biomed. Opt. Express 5(12), 4242-4248 (2014)  View: HTML | PDF

Measurement of a multi-layered tear film phantom using optical coherence tomography and statistical decision theory

Biomed. Opt. Express 5(12), 4374-4386 (2014)  View: HTML | PDF

Optical Coherence Tomography

Spotlight on Optics

Adaptive optics optical coherence tomography at 1 MHz

Biomed. Opt. Express 5(12), 4186-4200 (2014)  View: HTML | PDF  [Suppl. Mat. (3)]

Ex vivo 4D visualization of aortic valve dynamics in a murine model with optical coherence tomography

Biomed. Opt. Express 5(12), 4201-4212 (2014)  View: HTML | PDF  [Suppl. Mat. (1)]

Quantitative elasticity measurement of urinary bladder wall using laser-induced surface acoustic waves

Biomed. Opt. Express 5(12), 4313-4328 (2014)  View: HTML | PDF

Ultrahigh speed endoscopic optical coherence tomography for gastroenterology

Biomed. Opt. Express 5(12), 4387-4404 (2014)  View: HTML | PDF

Evaluation of flow velocities after carotid artery stenting through split spectrum Doppler optical coherence tomography and computational fluid dynamics modeling

Biomed. Opt. Express 5(12), 4405-4416 (2014)  View: HTML | PDF  [Suppl. Mat. (1)]

Optics of Tissue and Turbid Media

Characterizing the microstructures of biological tissues using Mueller matrix and transformed polarization parameters

Biomed. Opt. Express 5(12), 4223-4234 (2014)  View: HTML | PDF

Accuracy of oxygen saturation and total hemoglobin estimates in the neonatal brain using the semi-infinite slab model for FD-NIRS data analysis

Biomed. Opt. Express 5(12), 4300-4312 (2014)  View: HTML | PDF

Monte Carlo modeling of angiographic optical coherence tomography

Biomed. Opt. Express 5(12), 4338-4349 (2014)  View: HTML | PDF

Photoacoustic Imaging and Spectroscopy

Spotlight on Optics

Reflection-mode in vivo photoacoustic microscopy with subwavelength lateral resolution

Biomed. Opt. Express 5(12), 4235-4241 (2014)  View: HTML | PDF  [Suppl. Mat. (1)]

Engineering optically triggered droplets for photoacoustic imaging and therapy

Biomed. Opt. Express 5(12), 4417-4427 (2014)  View: HTML | PDF

Spectroscopic Diagnostics

Simultaneous decomposition of multiple hyperspectral data sets: signal recovery of unknown fluorophores in the retinal pigment epithelium

Biomed. Opt. Express 5(12), 4171-4185 (2014)  View: HTML | PDF

Wavelet based feature extraction and visualization in hyperspectral tissue characterization

Biomed. Opt. Express 5(12), 4260-4280 (2014)  View: HTML | PDF

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